pydtn agkmeans and version 1.0

Fatemeh's agkmeans, basic gui, prophet Version used for paper

examples/shed.py

@@ -12,6 +12,7 @@ from pprint import pprint
 from pydtn import Network, RandomTraffic, Node, EpidemicNode, CSVTrace
 from pydtn.community import BubbleKCliqueNode, BubbleLouvainNode
 from pydtn.community import HCBFKCliqueNode, HCBFLouvainNode
+from pydtn.community import  HCBFAGKmeansNode, BubbleAGKmeansNode
 
 
 Simulation = namedtuple('Simulation', ['trace', 'node_type', 'seed'])
@@ -25,13 +26,14 @@ def run_simulation(simulation):
     metadata = path.join(simulation.trace, 'metadata.json')
     trace = CSVTrace(csv, metadata=metadata)
 
-    epoch = 7*24*60*60  # 7 days
+    epoch = 7*24*60*60 # 7 days
 
     node_type = simulation.node_type
     node_options = {
         'tick_rate': 5 * 60,  # 5 mins
         'epoch': epoch,
         'k': 3,
+        'agk':3,
         'context': {}
     }
     nodes = {
@@ -61,6 +63,9 @@ def run_simulation(simulation):
 
 
 def main(args):
+
+
+
     """Run simulation for each seed in args."""
     log = pprint if args['pretty'] else print
     pool = Pool()
@@ -70,23 +75,28 @@ def main(args):
     node_types = [
         Node,
         EpidemicNode,
-        BubbleKCliqueNode,
-        HCBFKCliqueNode,
+        BubbleAGKmeansNode,
+        HCBFAGKmeansNode,
         BubbleLouvainNode,
         HCBFLouvainNode,
+        BubbleKCliqueNode,
+        HCBFKCliqueNode,
+
+
     ]
 
     for seed in args['seeds']:
         for node_type in node_types:
             sim = Simulation(trace=trace, node_type=node_type, seed=seed)
             simulations.append(sim)
-
     for stats in pool.imap_unordered(run_simulation, simulations):
+
         log(stats)
 
 
 def parse_args(args):
     """Parse arguments."""
+
     parser = ArgumentParser()
 
     parser.add_argument('shed')