pydtn agkmeans and version 1.0

Fatemeh's agkmeans, basic gui, prophet Version used for paper

examples/example2.py

@@ -43,11 +43,19 @@ def run_simulation(simulation):
     if simulation.traffic_options["start"] < simulation.node_options["epoch"]:
         simulation.traffic_options["start"] = simulation.node_options["epoch"]      # otherwise get none type error when clustering
 
-    traffic = RandomTraffic(nodes, **simulation.traffic_options)
+    traffic = RandomTraffic(nodes, **ChainMap(simulation.traffic_options, {"seed":simulation.seed}))
 
     network = Network(nodes, trace, traffic)
     network.run()
 
+    # record packets stats
+
+    with open("_packets_.txt", "a", encoding="utf-8") as file:
+        file.write("__" + str(simulation.node_type) + "__\n")
+        for packet in network.stats["packets"]:
+            file.write("S" + str(packet["source"].name) + "\tD" + str(packet["destination"].name) +
+                        "\ttrace: " + packet["traceroute"] + "\n")
+
     stats = {
         "trace": simulation.trace,
         "node_type": simulation.node_type.__name__,
@@ -161,10 +169,10 @@ def create_sim_list(config):
     )
 
     # overwrite seeds with random ones for fatemeh testing
-    batch = config["SimOptions"]["batch"]
-    seeds = []
-    for _ in range(batch):
-        seeds.append(randint(0, 500))
+    # batch = config["SimOptions"]["batch"]
+    # seeds = []
+    # for _ in range(batch):
+    #     seeds.append(randint(0, 500))
 
     for seed in seeds:
         for node_type in config["NodeChoices"]["Nodes"]: