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Commit 079e6414 authored by Thulani Hewavithana (qnm481)'s avatar Thulani Hewavithana (qnm481)
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Update README.md

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......@@ -164,8 +164,7 @@ file of each species before using DAGchainer. In order to do this, you can use t
$ python3 dir/transform_blast_to_dagchainer.py dir/abc_blast_filtered_modified.txt dir/query.bed (or dir/query.gff3) dir/subject.bed (or dir/subject.gff3)
When you run above python script it will generate an output file named transformed_blast_output_with_selected_columns.blast
Use this for dagchainer step
When you run above python script it will generate an output file named transformed_blast_output_with_selected_columns.blast. Use this for dagchainer step.
Here is a typical parameter setting for generating the
abc\_synteny.aligncoords file:
......
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