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Numerical_Simulations_Lab
Cardiac
OpenCARP Actors
Commits
8d8c3bdd
Commit
8d8c3bdd
authored
1 year ago
by
KyleKlenk
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Adjust parameters
parent
28e5fd63
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3 changed files
environment_setup/Dockerfile
+1
-1
1 addition, 1 deletion
environment_setup/Dockerfile
simulations/input/config_official.toml
+2
-6
2 additions, 6 deletions
simulations/input/config_official.toml
tests/input/config_test.toml
+4
-9
4 additions, 9 deletions
tests/input/config_test.toml
with
7 additions
and
16 deletions
environment_setup/Dockerfile
+
1
−
1
View file @
8d8c3bdd
...
@@ -70,7 +70,7 @@ WORKDIR /opt
...
@@ -70,7 +70,7 @@ WORKDIR /opt
RUN
git clone https://git.cs.usask.ca/numerical_simulations_lab/cardiac/openCARP.git
RUN
git clone https://git.cs.usask.ca/numerical_simulations_lab/cardiac/openCARP.git
WORKDIR
/opt/openCARP
WORKDIR
/opt/openCARP
RUN
git checkout develop
RUN
git checkout develop
RUN
cmake
-S
.
-B_build
-DDLOPEN
=
ON
-DUSE_OPENMP
=
ON
-DCMAKE_BUILD_TYPE
=
Release
RUN
cmake
-S
.
-B_build
-DDLOPEN
=
ON
-DUSE_OPENMP
=
ON
-DCMAKE_BUILD_TYPE
=
Release
-DENABLE_ACTORS
=
ON
RUN
cmake
--build
_build
RUN
cmake
--build
_build
# Install Carputils separately
# Install Carputils separately
...
...
This diff is collapsed.
Click to expand it.
simulations/input/config_official.toml
+
2
−
6
View file @
8d8c3bdd
...
@@ -5,6 +5,7 @@ results_file = "results.csv"
...
@@ -5,6 +5,7 @@ results_file = "results.csv"
tolerance
=
1000
tolerance
=
1000
# s1 parameters
# s1 parameters
s1_args
=
[
'openCARP'
,
'+F'
,
'/code/openCARP-Actors/simulations/input/s1.par'
]
s1_min
=
28167114.0
s1_min
=
28167114.0
s1_max
=
28167700.0
s1_max
=
28167700.0
...
@@ -15,10 +16,5 @@ s2_max = 1.0e8
...
@@ -15,10 +16,5 @@ s2_max = 1.0e8
s2_interval_min
=
185
s2_interval_min
=
185
s2_interval_max
=
205
s2_interval_max
=
205
s2_interval_increment
=
1
s2_interval_increment
=
1
skip_S1
=
true
# If True we use S1_max as the stimulus strength for S1 in the S2 simulation.
#
skip_S1 = true # If True we use S1_max as the stimulus strength for S1 in the S2 simulation.
[petsc]
[openCARP]
args
=
[
'openCARP'
,
'+F'
,
'/code/openCARP-Actors/simulations/input/s1.par'
]
This diff is collapsed.
Click to expand it.
tests/input/config_test.toml
+
4
−
9
View file @
8d8c3bdd
...
@@ -5,8 +5,9 @@ results_file = "/code/openCARP-Actors/tests/output/results.csv"
...
@@ -5,8 +5,9 @@ results_file = "/code/openCARP-Actors/tests/output/results.csv"
tolerance
=
1
tolerance
=
1
# s1 parameters
# s1 parameters
s1_min
=
32.0
s1_args
=
[
'openCARP'
,
'+F'
,
'/code/openCARP-Actors/tests/input/s1.par'
]
s1_max
=
32.0
s1_min
=
1.0
s1_max
=
50.0
# s2 parameters
# s2 parameters
s2_args
=
[
'openCARP'
,
'+F'
,
'/code/openCARP-Actors/tests/input/s2.par'
]
s2_args
=
[
'openCARP'
,
'+F'
,
'/code/openCARP-Actors/tests/input/s2.par'
]
...
@@ -15,10 +16,4 @@ s2_max = 500.0
...
@@ -15,10 +16,4 @@ s2_max = 500.0
s2_interval_min
=
245
s2_interval_min
=
245
s2_interval_max
=
250
s2_interval_max
=
250
s2_interval_increment
=
5
s2_interval_increment
=
5
skip_S1
=
true
# If True we use S1_max as the stimulus strength for S1 in the S2 simulation.
# skip_S1 = true # If True we use S1_max as the stimulus strength for S1 in the S2 simulation.
[petsc]
[openCARP]
args
=
[
'openCARP'
,
'+F'
,
'/code/openCARP-Actors/tests/input/s1.par'
]
\ No newline at end of file
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