Added some convience scripts for montoring output

Also added file for setting up a read the docs page

utils/netcdf/StatisticsScripts/resourageUsage.py

 import subprocess
+import csv
+from sys import argv
+
+def seffCommand(jobId, numJobs):
+    csvFile = open('SummaActors_jobStatistics.csv', 'w')
+    header = ["startHRU", "numHRU", "CPU", "CPU Efficiency", "Wall-Clock Time", "Memory Used"]
+
+    writer = csv.writer(csvFile)
+
+    writer.writerow(header)
+
+    startHRU = 1
+    numHRU = 1000
+    for i in range(0, int(numJobs)):
+        rowData = []
+        rowData = [numHRU * i + 1, numHRU]
+        cmdString = "seff {}_{}".format(jobId, i)
+        cmd = subprocess.Popen(cmdString, shell=True, stdout=subprocess.PIPE)
+        for line in cmd.stdout:
+            if b'Cores per node:' in line:
+                cores = line.decode().split(" ")[-1]
+                cores = cores.strip()
+            
+            if b'CPU Efficiency:' in line:
+                effeciency = line.decode().split(" ")[2]
+                effeciency = effeciency.strip()
+
+            if b'Job Wall-clock time:' in line:
+                wallClock = line.decode().split(" ")[-1]
+                wallClock = wallClock.strip()
+            
+            if b'Memory Utilized:' in line:
+                memory = line.decode().split(" ")[2]
+                memory = memory.strip()
+        
+        rowData.append(cores)
+        rowData.append(effeciency)
+        rowData.append(wallClock)
+        rowData.append(memory)
+        writer.writerow(rowData)
+
+    csvFile.close()
+            
+jobId = argv[1]
+print(jobId)
+
+numJobs = argv[2]
+print(numJobs)
+
+seffCommand(jobId, numJobs)
 
-cmd = subprocess.Popen('seff 59326149_1', shell=True, stdout=subprocess.PIPE)
 
-for line in cmd.stdout:
-    if b'CPU Utilized:' in line:
-        print(line)
\ No newline at end of file

utils/netcdf/StatisticsScripts/summarize_summaActors.py

+import os
+import re
+import sys
+
+summaryFile = '_log_summaryActors.txt'
+ext = ".out"
+
+if len(sys.argv) == 1:
+	sys.exit('Error: no input folder specified')
+
+else:
+
+	folder = sys.argv[1]
+
+def determine_output(folder,file):
+	outFile = open(folder + file, 'r')
+	print(outFile)
+	try:
+		lines = outFile.readlines()
+	except UnicodeDecodeError:
+		outFile.close()
+		outFile = open(folder + file, encoding = "ISO-8859-1")
+		lines = outFile.readlines()
+	counter = 1
+	for line in reversed(lines):
+		if counter > 30:
+			return -1
+		else:
+			if "Hours" in line:
+				hours = re.findall("\d+\.\d+", line)
+				return hours
+			counter += 1
+		
+
+try:
+	os.remove(folder + "/" + summaryFile)
+except OSError:
+	pass
+
+files = []
+for file in os.listdir(folder):
+	if file.endswith(ext):
+		files.append(file)
+
+files.sort()
+
+total_success = []
+
+computation_time = []
+
+with open(folder + '/' + summaryFile, "w") as sf:
+	sf.write('Summarizing log files in ' + folder + '\n \n')
+	sf.write('Log files' + '\n')
+
+	for file in files:
+		value = determine_output(folder, file)
+		if value == -1:
+			sf.write("{} - Still Running or Failed\n".format(file))
+		else:
+			sf.write("{} - Success after {} hours \n".format(file, value[0]))
+
+
+