From a7748a24cf7f10528e42c8360f6b073e5291e816 Mon Sep 17 00:00:00 2001 From: "Thulani Hewavithana (qnm481)" <qnm481@mail.usask.ca> Date: Fri, 18 Aug 2023 17:53:30 -0600 Subject: [PATCH] Update README.md --- README.md | 18 +++++++++--------- 1 file changed, 9 insertions(+), 9 deletions(-) diff --git a/README.md b/README.md index 7839f52..cab6ced 100644 --- a/README.md +++ b/README.md @@ -300,15 +300,15 @@ The modified\_chr\_names{k+1}.xlsx file holds the replaced gene id\'s with there corresponding chromosome names which they bellong to if they are not already placed inside the subgenome columns (to detect the genes that has been removed based on density threshold): -Gene_id N1 N1.r N2 N2.r N3 N3.r N4 N4.r N5 N5.r N6 N6.r N7 N7.r -AT1G01900 0 0 0 0 0 0 0 0 0 1 0 0 0 0 -AT1G01910 0 0 0 0 0 0 0 0 0 0 0 1 0 0 -AT1G01920 0 0 0 0 0 0 0 0 0 0 0 1 0 0 -AT1G01930 0 0 0 0 0 0 0 0 0 0 0 1 0 0 -AT1G01940 0 0 0 0 0 0 0 0 0 0 0 1 0 0 -AT1G01950 0 0 0 0 0 0 0 0 0 0 N6 0 0 0 -AT1G01960 0 0 0 0 0 0 0 0 0 0 0 1 0 0 -AT1G01970 0 0 0 0 0 0 0 0 0 1 0 0 0 0 + Gene_id N1 N1.r N2 N2.r N3 N3.r N4 N4.r N5 N5.r N6 N6.r N7 N7.r + AT1G01900 0 0 0 0 0 0 0 0 0 1 0 0 0 0 + AT1G01910 0 0 0 0 0 0 0 0 0 0 0 1 0 0 + AT1G01920 0 0 0 0 0 0 0 0 0 0 0 1 0 0 + AT1G01930 0 0 0 0 0 0 0 0 0 0 0 1 0 0 + AT1G01940 0 0 0 0 0 0 0 0 0 0 0 1 0 0 + AT1G01950 0 0 0 0 0 0 0 0 0 0 N6 0 0 0 + AT1G01960 0 0 0 0 0 0 0 0 0 0 0 1 0 0 + AT1G01970 0 0 0 0 0 0 0 0 0 1 0 0 0 0 The subgenome\_placement\_blocks.all{k+1}.xlsx file holds the placement of genes in subgenomes optimal for each subgenome considering the subgenome separation optimal for each subgenome in step 4: -- GitLab