diff --git a/simulations/Joyce_Sep26_4x4x025mm-input/config_official.toml b/simulations/Joyce_Sep26_4x4x025mm-input/config_official.toml index e65d99fb4ce3e1f86e0d4018c433c39a2dbd1ed9..7affc47fc0cb313c24bbf55bd4b1dce6b7cac231 100755 --- a/simulations/Joyce_Sep26_4x4x025mm-input/config_official.toml +++ b/simulations/Joyce_Sep26_4x4x025mm-input/config_official.toml @@ -1,18 +1,18 @@ [actors] # global parameters -output_dir = "/code/openCARP-Actors/simulations/4x4x025-output/" -results_file = "/code/openCARP-Actors/simulations/4x4x025-output/results.csv" +output_dir = "/code/openCARP-Actors/simulations/output/" +results_file = "/code/openCARP-Actors/simulations/output/results.csv" tolerance = 100000 # s1 parameters -s1_args = ['openCARP', '+F', '/code/openCARP-Actors/simulations/input/s1.par'] +s1_args = ['openCARP', '+F', '/code/openCARP-Actors/simulations/Joyce_Sep26_4x4x025mm-input/s1.par'] s1_min = 26000000.0 #28167114.0 s1_max = 72500000 #28167700.0 s1_skip_strength = 72500000.0 # s2 parameters -s2_args = ['openCARP', '+F', '/code/openCARP-Actors/simulations/input/s2.par'] +s2_args = ['openCARP', '+F', '/code/openCARP-Actors/simulations/Joyce_Sep26_4x4x025mm-input/s2.par'] s2_min = 72500000 s2_max = 217000000 #1500000000 - max s2_interval_min = 200 #just testing 200ms - should fire AP at 217000000 diff --git a/simulations/Joyce_Sep26_4x4x025mm-input/s1.par b/simulations/Joyce_Sep26_4x4x025mm-input/s1.par index e7b607182445aea1a7a3a284ad3eadc738586a18..91fcdfb29aa5b5ca27b3802f7f0f5a286a387aa9 100755 --- a/simulations/Joyce_Sep26_4x4x025mm-input/s1.par +++ b/simulations/Joyce_Sep26_4x4x025mm-input/s1.par @@ -2,7 +2,7 @@ # Mesh Needs to be generated first by Carputils -meshname = /code/openCARP-Actors/simulations/input/meshes/4x4x025_mesh/block +meshname = /code/openCARP-Actors/simulations/Joyce_Sep26_4x4x025mm-input/meshes/4x4x025_mesh/block ############### physical regions ############## diff --git a/simulations/Joyce_Sep26_4x4x025mm-input/s2.par b/simulations/Joyce_Sep26_4x4x025mm-input/s2.par index f4ef4c531792bca738a456bca38cdbeb6756818d..661153372916ea53ebc71fd555817d86615baec0 100755 --- a/simulations/Joyce_Sep26_4x4x025mm-input/s2.par +++ b/simulations/Joyce_Sep26_4x4x025mm-input/s2.par @@ -2,7 +2,7 @@ # Mesh Needs to be generated first by Carputils -meshname = /code/openCARP-Actors/simulations/input/meshes/4x4x025_mesh/block +meshname = /code/openCARP-Actors/simulations/Joyce_Sep26_4x4x025mm-input/meshes/4x4x025_mesh/block ############### physical regions ############## num_phys_regions = 2 @@ -22,10 +22,10 @@ imp_region[0].im = Shannon ############## stimulus setup ################# num_stim = 3 stimulus[0].name = "S1" -stimulus[0].stimtype = 1 -stimulus[0].duration = 2. -stimulus[0].start = 0. -stimulus[0].npls = 1 +stimulus[0].stimtype = 1 +stimulus[0].duration = 2. +stimulus[0].start = 0. +stimulus[0].npls = 1 stimulus[0].x0 = -12.5 #in um stimulus[0].xd = 248.6 #thickness in um stimulus[0].y0 = -12.5 @@ -33,9 +33,9 @@ stimulus[0].yd = 248.6 stimulus[0].z0 = 12.5 stimulus[0].zd = 25.0 stimulus[1].name = "S2" -stimulus[1].stimtype = 1 -stimulus[1].duration = 2. -stimulus[1].npls = 1 +stimulus[1].stimtype = 1 +stimulus[1].duration = 2. +stimulus[1].npls = 1 stimulus[1].x0 = -12.5 stimulus[1].xd = 248.6 stimulus[1].y0 = -12.5 @@ -43,13 +43,13 @@ stimulus[1].yd = 248.6 stimulus[1].z0 = 12.5 stimulus[1].zd = 25.0 stimulus[2].name = "Ground" -stimulus[2].stimtype = 3 +stimulus[2].stimtype = 3 stimulus[2].x0 = -12.5 stimulus[2].xd = 4025.0 stimulus[2].y0 = -12.5 stimulus[2].yd = 4025.0 stimulus[2].z0 = -12.5 -stimulus[2].zd = 4025.0 +stimulus[2].zd = 25.0 ################# Simulation parameters ################# bidomain = 1 @@ -58,7 +58,6 @@ spacedt = 1.0 timedt = 1.0 parab_solve = 1 - ############# Notes ############# # S1-S2 script params to start with: # S1 min = 1.0e7