From c59d8931af30836aa084a964ff7727add0dfe137 Mon Sep 17 00:00:00 2001
From: KyleKlenk <kyle.c.klenk@gmail.com>
Date: Wed, 23 Aug 2023 16:36:53 -0600
Subject: [PATCH] Created container for Summa_Actors and Fixed issues with
compiling with g++11.
---
build/includes/global/timing_info.hpp | 1 +
build/includes/job_actor/GRU.hpp | 4 +-
build/source/actors/job_actor/GRU.cpp | 5 +++
build/source/actors/job_actor/job_actor.cpp | 2 +-
utils/containers/apptainer.def | 49 +++++++++++++++++++++
5 files changed, 57 insertions(+), 4 deletions(-)
create mode 100644 utils/containers/apptainer.def
diff --git a/build/includes/global/timing_info.hpp b/build/includes/global/timing_info.hpp
index e246a6c..9244428 100644
--- a/build/includes/global/timing_info.hpp
+++ b/build/includes/global/timing_info.hpp
@@ -2,6 +2,7 @@
#include <chrono>
#include <optional>
#include <vector>
+#include <string>
using chrono_time = std::chrono::time_point<std::chrono::system_clock>;
/**
diff --git a/build/includes/job_actor/GRU.hpp b/build/includes/job_actor/GRU.hpp
index 4d57edf..3c33f51 100644
--- a/build/includes/job_actor/GRU.hpp
+++ b/build/includes/job_actor/GRU.hpp
@@ -13,9 +13,7 @@ enum class gru_state {
succeeded
};
-auto success = [](const gru_state& state) -> int {
- return(state == gru_state::succeeded) ? 1 : 0;
-};
+int is_success(const gru_state& state);
/**
* Class that holds information about the running GRUs. This class is held by the job actor
diff --git a/build/source/actors/job_actor/GRU.cpp b/build/source/actors/job_actor/GRU.cpp
index 9b43067..3f81ab2 100644
--- a/build/source/actors/job_actor/GRU.cpp
+++ b/build/source/actors/job_actor/GRU.cpp
@@ -4,6 +4,11 @@
#include <fstream>
+int is_success(const gru_state& state) {
+
+ return(state == gru_state::succeeded) ? 1 : 0;
+}
+
GRU::GRU(int global_gru_index, int local_gru_index, caf::actor gru_actor,
int dt_init_factor, double rel_tol, double abs_tol, int max_attempt) {
diff --git a/build/source/actors/job_actor/job_actor.cpp b/build/source/actors/job_actor/job_actor.cpp
index 96d4f77..4fa5583 100644
--- a/build/source/actors/job_actor/job_actor.cpp
+++ b/build/source/actors/job_actor/job_actor.cpp
@@ -267,7 +267,7 @@ std::vector<serializable_netcdf_gru_actor_info> getGruNetcdfInfo(int max_run_att
gru_info.write_output_duration = gru->getWriteOutputDuration();
gru_info.num_attempts = max_run_attempts - gru->getAttemptsLeft() + 1;
- gru_info.successful = success(gru->getStatus());
+ gru_info.successful = is_success(gru->getStatus());
gru_info.rel_tol = gru->getRelTol();
gru_info.abs_tol = gru->getAbsTol();
diff --git a/utils/containers/apptainer.def b/utils/containers/apptainer.def
new file mode 100644
index 0000000..aa1f124
--- /dev/null
+++ b/utils/containers/apptainer.def
@@ -0,0 +1,49 @@
+Bootstrap: docker
+From: ubuntu:22.04
+
+%post
+ apt-get update -y
+ apt-get install locales -y
+ locale-gen en_CA.UTF-8
+ apt-get upgrade -y
+
+ # Install dependencies
+ DEBIAN_FRONTEND="noninteractive" apt-get install -y software-properties-common \
+ libnetcdf-dev \
+ libnetcdff-dev \
+ liblapack-dev \
+ libopenblas-dev \
+ cmake \
+ g++ \
+ git \
+ libssl-dev \
+ make \
+ gfortran \
+ wget \
+ python3-pip \
+ valgrind \
+ gdb &&\
+ apt-get autoclean
+
+ # Install Sundials v6.6
+ cd /opt
+ wget https://github.com/LLNL/sundials/releases/download/v6.6.0/sundials-6.6.0.tar.gz
+ tar -xzf sundials-6.6.0.tar.gz
+ mkdir /usr/local/sundials/
+ mkdir /usr/local/sundials/v6.6
+ cd sundials-6.6.0
+ mkdir build
+ cd build
+ cmake .. -DBUILD_FORTRAN_MODULE_INTERFACE=ON -DCMAKE_Fortran_COMPILER=gfortran -DCMAKE_INSTALL_PREFIX=/usr/local/sundials/v6.6 -DEXAMPLES_INSTALL_PATH=/usr/local/sundials/v6.6/examples
+ make
+ make install
+
+ # Install C++ Actor Framework
+ cd /opt
+ wget https://github.com/actor-framework/actor-framework/archive/refs/tags/0.18.6.tar.gz
+ tar -xzf 0.18.6.tar.gz
+ cd actor-framework-0.18.6
+ ./configure
+ cd build
+ make
+ make install
\ No newline at end of file
--
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